Generated: 2025-07-27 15:59:41
Sections: alpha_diversity, shap, violin
| Feature | Taxonomic Level | Test | Effect Size | P-value | Direction | Functions |
|---|---|---|---|---|---|---|
| d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae | family | ttest | 8.7285 | 5.29e-05 | positive | |
| d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales | order | ttest | 7.2508 | 1.57e-03 | positive | |
| d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Comamonadaceae | family | ttest | 7.0821 | 1.00e-10 | positive | |
| d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Geobacteraceae | family | ttest | 5.0340 | 2.38e-07 | positive | |
| d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales | order | ttest | 4.6415 | 1.30e-06 | positive | |
| d__Bacteria;p__Dependentiae;c__Babeliae | class | ttest | 4.5236 | 1.73e-07 | positive | |
| d__Bacteria;p__Dependentiae;c__Babeliae;o__Babeliales | order | ttest | 4.4370 | 2.84e-07 | positive | |
| d__Bacteria;p__Dependentiae | phylum | ttest | 4.1622 | 1.03e-06 | positive | |
| d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Comamonadaceae;g__Comamonas | genus | ttest | 3.8361 | 1.00e-10 | positive | |
| d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pectobacteriaceae;g__Dickeya | genus | ttest | 3.6117 | 1.00e-10 | positive | fermentation |
| d__Bacteria;p__Verrucomicrobiota;c__Chlamydiae;o__Chlamydiales | order | ttest | 3.5409 | 1.03e-06 | positive | intracellular_parasites |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;__;__ | genus | ttest | 3.3662 | 1.00e-10 | positive | |
| d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Pectobacteriaceae | family | ttest | 3.2440 | 1.00e-10 | positive | fermentation |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium | genus | ttest | 3.2103 | 1.00e-10 | positive | nitrogen_fixation, aerobic_chemoheterotrophy |
| d__Bacteria;p__Deinococcota;c__Deinococci;o__Thermales;f__Thermaceae;g__Meiothermus | genus | ttest | 3.1778 | 1.00e-10 | positive | |
| d__Bacteria;p__Armatimonadota | phylum | ttest | 3.0966 | 1.00e-10 | positive | |
| d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;__;__;__ | genus | ttest | 3.0814 | 1.00e-10 | positive | |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales | order | ttest | 3.0073 | 1.33e-04 | positive | |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;__ | family | ttest | 2.9326 | 1.00e-10 | positive | |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae | family | ttest | 2.9083 | 2.13e-04 | positive |
| Feature | Taxonomic Level | Test | Effect Size | P-value | Direction | Functions |
|---|---|---|---|---|---|---|
| d__Bacteria;p__Actinobacteriota | phylum | ttest | -43.7643 | 1.00e-10 | negative | |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria | class | ttest | -30.2161 | 1.00e-10 | negative | |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales | order | ttest | -26.1739 | 1.00e-10 | negative | |
| d__Bacteria;p__Acidobacteriota | phylum | ttest | -24.8981 | 1.00e-10 | negative | |
| d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae | class | ttest | -22.6807 | 1.00e-10 | negative | |
| d__Bacteria;p__Actinobacteriota;c__Actinobacteria | class | ttest | -20.5215 | 4.80e-10 | negative | |
| d__Bacteria;p__Chloroflexi | phylum | ttest | -19.2393 | 1.00e-10 | negative | |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae | family | ttest | -16.6170 | 1.00e-10 | negative | dark_hydrogen_oxidation |
| d__Bacteria;p__Actinobacteriota;c__Thermoleophilia | class | ttest | -14.3289 | 1.00e-10 | negative | |
| d__Bacteria;p__Planctomycetota | phylum | ttest | -12.9499 | 5.67e-07 | negative | |
| d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria | class | ttest | -12.0910 | 1.00e-10 | negative | |
| d__Bacteria;p__Verrucomicrobiota | phylum | ttest | -11.9246 | 1.00e-10 | negative | |
| d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales | order | ttest | -11.0172 | 1.00e-10 | negative | chemoheterotrophy |
| d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia | class | ttest | -10.2659 | 1.00e-10 | negative | |
| d__Bacteria;p__Chloroflexi;c__Ktedonobacteria | class | ttest | -10.2258 | 1.00e-10 | negative | |
| d__Bacteria;p__Planctomycetota;c__Planctomycetes | class | ttest | -10.0868 | 5.87e-08 | negative | |
| d__Bacteria;p__Chloroflexi;c__Ktedonobacteria;o__Ktedonobacterales | order | ttest | -9.5817 | 1.00e-10 | negative | |
| d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales | order | ttest | -9.4309 | 1.00e-10 | negative | |
| d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Gaiellales | order | ttest | -8.5134 | 1.00e-10 | negative | |
| d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__Pedosphaeraceae | family | ttest | -8.1764 | 1.00e-10 | negative |
| Feature | Taxonomic Level | Test | Effect Size | P-value | Direction | Functions |
|---|---|---|---|---|---|---|
| d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales | order | ttest | 4.6825 | 6.76e-04 | positive | |
| d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae | family | ttest | 4.0092 | 3.50e-03 | positive | |
| d__Bacteria;p__Chloroflexi;c__Anaerolineae | class | ttest | 2.7563 | 2.10e-04 | positive | |
| d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales;f__Geobacteraceae | family | ttest | 1.7088 | 7.91e-04 | positive | |
| d__Bacteria;p__Planctomycetota;c__Planctomycetes;o__Pirellulales | order | ttest | 1.6639 | 1.07e-02 | positive | |
| d__Bacteria;p__Planctomycetota;c__Planctomycetes;o__Pirellulales;f__Pirellulaceae | family | ttest | 1.6362 | 1.25e-02 | positive | |
| d__Bacteria;p__Dependentiae;c__Babeliae | class | ttest | 1.6175 | 3.97e-04 | positive | |
| d__Bacteria;p__Dependentiae | phylum | ttest | 1.6163 | 4.26e-04 | positive | |
| d__Bacteria;p__Dependentiae;c__Babeliae;o__Babeliales | order | ttest | 1.5925 | 5.08e-04 | positive | |
| d__Bacteria;p__Desulfobacterota;c__Desulfuromonadia;o__Geobacterales | order | ttest | 1.4246 | 4.90e-03 | positive | |
| d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Micrococcales;f__Micrococcaceae;g__Arthrobacter | genus | ttest | 1.1831 | 7.34e-08 | positive | |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales | order | ttest | 1.1628 | 1.93e-02 | positive | |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae | family | ttest | 1.1620 | 2.02e-02 | positive | |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae | family | ttest | 1.1447 | 1.16e-02 | positive | |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;__ | genus | ttest | 1.0911 | 1.12e-06 | positive | |
| d__Bacteria;p__Bacteroidota;c__Kryptonia;o__Kryptoniales | order | ttest | 1.0469 | 6.09e-09 | positive | |
| d__Bacteria;p__Bacteroidota;c__Kryptonia | class | ttest | 1.0131 | 1.30e-08 | positive | |
| d__Bacteria;p__Deinococcota;c__Deinococci;o__Thermales;f__Thermaceae;g__Meiothermus | genus | ttest | 0.9870 | 1.24e-07 | positive | |
| d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Comamonadaceae;__ | genus | ttest | 0.9743 | 9.01e-05 | positive | |
| d__Archaea;p__Euryarchaeota;c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__Methanobacterium | genus | ttest | 0.9311 | 3.82e-09 | positive |
| Feature | Taxonomic Level | Test | Effect Size | P-value | Direction | Functions |
|---|---|---|---|---|---|---|
| d__Bacteria;p__Actinobacteriota | phylum | ttest | -20.5596 | 5.06e-07 | negative | |
| d__Bacteria;p__Actinobacteriota;c__Actinobacteria | class | ttest | -9.1096 | 5.66e-04 | negative | |
| d__Bacteria;p__Chloroflexi | phylum | ttest | -9.0144 | 1.35e-08 | negative | |
| d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae | class | ttest | -8.9620 | 1.00e-10 | negative | |
| d__Bacteria;p__Acidobacteriota | phylum | ttest | -8.6943 | 1.62e-05 | negative | |
| d__Bacteria;p__Acidobacteriota;c__Acidobacteriae | class | ttest | -8.2788 | 1.00e-10 | negative | |
| d__Bacteria;p__Chloroflexi;c__Ktedonobacteria | class | ttest | -8.0614 | 1.00e-10 | negative | |
| d__Bacteria;p__Chloroflexi;c__Ktedonobacteria;o__Ktedonobacterales | order | ttest | -7.9343 | 1.00e-10 | negative | |
| d__Bacteria;p__Actinobacteriota;c__Thermoleophilia | class | ttest | -7.0425 | 2.15e-09 | negative | |
| d__Bacteria;p__Chloroflexi;c__Ktedonobacteria;o__Ktedonobacterales;f__Ktedonobacteraceae | family | ttest | -6.5576 | 1.00e-10 | negative | |
| d__Bacteria;p__Patescibacteria | phylum | ttest | -6.3152 | 6.56e-08 | negative | |
| d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales | order | ttest | -5.6075 | 1.00e-10 | negative | |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae | family | ttest | -5.2622 | 1.00e-10 | negative | dark_hydrogen_oxidation |
| d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia | class | ttest | -4.9436 | 1.70e-09 | negative | |
| d__Bacteria;p__Verrucomicrobiota | phylum | ttest | -4.6567 | 3.80e-06 | negative | |
| d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales | order | ttest | -4.4163 | 1.00e-10 | negative | |
| d__Bacteria;p__Patescibacteria;c__Saccharimonadia;o__Saccharimonadales | order | ttest | -3.9320 | 1.00e-10 | negative | |
| d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales | order | ttest | -3.9287 | 2.10e-02 | negative | |
| d__Bacteria;p__Patescibacteria;c__Saccharimonadia | class | ttest | -3.8442 | 1.00e-10 | negative | |
| d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Gaiellales | order | ttest | -3.5051 | 2.13e-10 | negative |
| Column | Table Type | Test | Level | Significant Features | Total Features |
|---|---|---|---|---|---|
| nuclear_contamination_status | raw | mwu_bonferroni | phylum | 41 | 41 |
| nuclear_contamination_status | raw | kruskal_bonferroni | phylum | 41 | 41 |
| nuclear_contamination_status | raw | mwu_bonferroni | class | 125 | 125 |
| nuclear_contamination_status | raw | kruskal_bonferroni | class | 125 | 125 |
| nuclear_contamination_status | raw | mwu_bonferroni | order | 243 | 243 |
| nuclear_contamination_status | raw | kruskal_bonferroni | order | 243 | 243 |
| nuclear_contamination_status | raw | mwu_bonferroni | family | 405 | 405 |
| nuclear_contamination_status | raw | kruskal_bonferroni | family | 405 | 405 |
| nuclear_contamination_status | raw | mwu_bonferroni | genus | 644 | 644 |
| nuclear_contamination_status | raw | kruskal_bonferroni | genus | 644 | 644 |
| nuclear_contamination_status | filtered | mwu_bonferroni | phylum | 41 | 41 |
| nuclear_contamination_status | filtered | kruskal_bonferroni | phylum | 41 | 41 |
| nuclear_contamination_status | filtered | mwu_bonferroni | class | 125 | 125 |
| nuclear_contamination_status | filtered | kruskal_bonferroni | class | 125 | 125 |
| nuclear_contamination_status | filtered | mwu_bonferroni | order | 243 | 243 |
| nuclear_contamination_status | filtered | kruskal_bonferroni | order | 243 | 243 |
| nuclear_contamination_status | filtered | mwu_bonferroni | family | 405 | 405 |
| nuclear_contamination_status | filtered | kruskal_bonferroni | family | 405 | 405 |
| nuclear_contamination_status | filtered | mwu_bonferroni | genus | 644 | 644 |
| nuclear_contamination_status | filtered | kruskal_bonferroni | genus | 644 | 644 |
| nuclear_contamination_status | normalized | ttest | phylum | 81 | 81 |
| nuclear_contamination_status | normalized | mwu_bonferroni | phylum | 41 | 41 |
| nuclear_contamination_status | normalized | kruskal_bonferroni | phylum | 41 | 41 |
| nuclear_contamination_status | normalized | ttest | class | 227 | 227 |
| nuclear_contamination_status | normalized | mwu_bonferroni | class | 125 | 125 |
| nuclear_contamination_status | normalized | kruskal_bonferroni | class | 125 | 125 |
| nuclear_contamination_status | normalized | ttest | order | 573 | 573 |
| nuclear_contamination_status | normalized | mwu_bonferroni | order | 243 | 243 |
| nuclear_contamination_status | normalized | kruskal_bonferroni | order | 243 | 243 |
| nuclear_contamination_status | normalized | ttest | family | 973 | 973 |
| nuclear_contamination_status | normalized | mwu_bonferroni | family | 405 | 405 |
| nuclear_contamination_status | normalized | kruskal_bonferroni | family | 405 | 405 |
| nuclear_contamination_status | normalized | ttest | genus | 2126 | 2126 |
| nuclear_contamination_status | normalized | mwu_bonferroni | genus | 644 | 644 |
| nuclear_contamination_status | normalized | kruskal_bonferroni | genus | 644 | 644 |
| nuclear_contamination_status | clr_transformed | ttest | phylum | 22 | 22 |
| nuclear_contamination_status | clr_transformed | mwu_bonferroni | phylum | 13 | 13 |
| nuclear_contamination_status | clr_transformed | kruskal_bonferroni | phylum | 13 | 13 |
| nuclear_contamination_status | clr_transformed | ttest | class | 68 | 68 |
| nuclear_contamination_status | clr_transformed | mwu_bonferroni | class | 43 | 43 |
| nuclear_contamination_status | clr_transformed | kruskal_bonferroni | class | 43 | 43 |
| nuclear_contamination_status | clr_transformed | ttest | order | 149 | 149 |
| nuclear_contamination_status | clr_transformed | mwu_bonferroni | order | 85 | 85 |
| nuclear_contamination_status | clr_transformed | kruskal_bonferroni | order | 85 | 85 |
| nuclear_contamination_status | clr_transformed | ttest | family | 229 | 229 |
| nuclear_contamination_status | clr_transformed | mwu_bonferroni | family | 123 | 123 |
| nuclear_contamination_status | clr_transformed | kruskal_bonferroni | family | 123 | 123 |
| nuclear_contamination_status | clr_transformed | ttest | genus | 396 | 396 |
| nuclear_contamination_status | clr_transformed | mwu_bonferroni | genus | 196 | 196 |
| nuclear_contamination_status | clr_transformed | kruskal_bonferroni | genus | 196 | 196 |
| nuclear_contamination_status | presence_absence | fisher | phylum | 21 | 21 |
| nuclear_contamination_status | presence_absence | fisher | class | 55 | 55 |
| nuclear_contamination_status | presence_absence | fisher | order | 129 | 129 |
| nuclear_contamination_status | presence_absence | fisher | family | 223 | 223 |
| nuclear_contamination_status | presence_absence | fisher | genus | 375 | 375 |
| facility_match | raw | mwu_bonferroni | phylum | 59 | 59 |
| facility_match | raw | kruskal_bonferroni | phylum | 59 | 59 |
| facility_match | raw | mwu_bonferroni | class | 137 | 137 |
| facility_match | raw | kruskal_bonferroni | class | 137 | 137 |
| facility_match | raw | mwu_bonferroni | order | 270 | 270 |
| facility_match | raw | kruskal_bonferroni | order | 270 | 270 |
| facility_match | raw | mwu_bonferroni | family | 416 | 416 |
| facility_match | raw | kruskal_bonferroni | family | 416 | 416 |
| facility_match | raw | mwu_bonferroni | genus | 712 | 712 |
| facility_match | raw | kruskal_bonferroni | genus | 712 | 712 |
| facility_match | filtered | mwu_bonferroni | phylum | 59 | 59 |
| facility_match | filtered | kruskal_bonferroni | phylum | 59 | 59 |
| facility_match | filtered | mwu_bonferroni | class | 137 | 137 |
| facility_match | filtered | kruskal_bonferroni | class | 137 | 137 |
| facility_match | filtered | mwu_bonferroni | order | 270 | 270 |
| facility_match | filtered | kruskal_bonferroni | order | 270 | 270 |
| facility_match | filtered | mwu_bonferroni | family | 416 | 416 |
| facility_match | filtered | kruskal_bonferroni | family | 416 | 416 |
| facility_match | filtered | mwu_bonferroni | genus | 712 | 712 |
| facility_match | filtered | kruskal_bonferroni | genus | 712 | 712 |
| facility_match | normalized | ttest | phylum | 71 | 71 |
| facility_match | normalized | mwu_bonferroni | phylum | 59 | 59 |
| facility_match | normalized | kruskal_bonferroni | phylum | 59 | 59 |
| facility_match | normalized | ttest | class | 182 | 182 |
| facility_match | normalized | mwu_bonferroni | class | 137 | 137 |
| facility_match | normalized | kruskal_bonferroni | class | 137 | 137 |
| facility_match | normalized | ttest | order | 402 | 402 |
| facility_match | normalized | mwu_bonferroni | order | 270 | 270 |
| facility_match | normalized | kruskal_bonferroni | order | 270 | 270 |
| facility_match | normalized | ttest | family | 662 | 662 |
| facility_match | normalized | mwu_bonferroni | family | 416 | 416 |
| facility_match | normalized | kruskal_bonferroni | family | 416 | 416 |
| facility_match | normalized | ttest | genus | 1340 | 1340 |
| facility_match | normalized | mwu_bonferroni | genus | 712 | 712 |
| facility_match | normalized | kruskal_bonferroni | genus | 712 | 712 |
| facility_match | clr_transformed | ttest | phylum | 16 | 16 |
| facility_match | clr_transformed | mwu_bonferroni | phylum | 9 | 9 |
| facility_match | clr_transformed | kruskal_bonferroni | phylum | 9 | 9 |
| facility_match | clr_transformed | ttest | class | 50 | 50 |
| facility_match | clr_transformed | mwu_bonferroni | class | 20 | 20 |
| facility_match | clr_transformed | kruskal_bonferroni | class | 20 | 20 |
| facility_match | clr_transformed | ttest | order | 114 | 114 |
| facility_match | clr_transformed | mwu_bonferroni | order | 42 | 42 |
| facility_match | clr_transformed | kruskal_bonferroni | order | 42 | 42 |
| facility_match | clr_transformed | ttest | family | 180 | 180 |
| facility_match | clr_transformed | mwu_bonferroni | family | 59 | 59 |
| facility_match | clr_transformed | kruskal_bonferroni | family | 59 | 59 |
| facility_match | clr_transformed | ttest | genus | 288 | 288 |
| facility_match | clr_transformed | mwu_bonferroni | genus | 48 | 48 |
| facility_match | clr_transformed | kruskal_bonferroni | genus | 48 | 48 |
| facility_match | presence_absence | fisher | phylum | 18 | 18 |
| facility_match | presence_absence | fisher | class | 44 | 44 |
| facility_match | presence_absence | fisher | order | 93 | 93 |
| facility_match | presence_absence | fisher | family | 144 | 144 |
| facility_match | presence_absence | fisher | genus | 279 | 279 |
| Table Type | Level | Method | Top Features | Accuracy | F1 ScoreBalance between precision and recall... | MCCBalanced classifier metric (-1 to 1) that considers all confusion matrix values... | ROC AUCProbability that random positive ranks higher than random negative... | PR AUCPositive-class focused metric for imbalanced data... |
|---|---|---|---|---|---|---|---|---|
| normalized | phylum | rfe | 29 | 0.9966 | 0.9344 | 0.9339 | 0.9990 | 0.9677 |
| Table Type | Level | Method | Rank | Feature | Importance |
|---|---|---|---|---|---|
| normalized | phylum | rfe | 1 | d__Bacteria;p__Verrucomicrobiota | 19.1296 |
| normalized | phylum | rfe | 2 | d__Bacteria;p__Bacteroidota | 16.9407 |
| normalized | phylum | rfe | 3 | d__Bacteria;p__Proteobacteria | 12.5686 |
| normalized | phylum | rfe | 4 | d__Bacteria;p__Planctomycetota | 7.2250 |
| normalized | phylum | rfe | 5 | d__Bacteria;__ | 7.1208 |
| normalized | phylum | rfe | 6 | d__Bacteria;p__Actinobacteriota | 6.6038 |
| normalized | phylum | rfe | 7 | d__Bacteria;p__Bdellovibrionota | 4.2065 |
| normalized | phylum | rfe | 8 | d__Bacteria;p__Patescibacteria | 3.4625 |
| normalized | phylum | rfe | 9 | d__Bacteria;p__Myxococcota | 3.3626 |
| normalized | phylum | rfe | 10 | d__Bacteria;p__Elusimicrobiota | 3.0188 |
Comprehensive SHAP analysis for top features across all models:
| Table Type | Level | Method | Feature | Mean |SHAP| | Beeswarm Interpretation | Spearman's ρ | Dependency plot interpretation Relationship | Partner Feature | Interaction Strength | Relationship | ρ (Feature) | ρ (Partner) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| normalized | phylum | rfe | d__Bacteria;p__Verrucomicrobiota | higher → lower prediction | -0.80 | d__Bacteria;p__Actinobacteriota | 0.156 | mutually diminishing | -0.57 | -0.41 | ||
| normalized | phylum | rfe | d__Bacteria;p__Bacteroidota | higher → higher prediction | 0.97 | d__Bacteria;p__Actinobacteriota | 0.118 | opposing or balancing | -0.30 | 0.33 | ||
| normalized | phylum | rfe | d__Bacteria;p__Actinobacteriota | higher → lower prediction | -0.85 | d__Bacteria;p__Verrucomicrobiota | 0.156 | mutually diminishing | -0.41 | -0.57 | ||
| normalized | phylum | rfe | d__Bacteria;p__Proteobacteria | higher → higher prediction | 0.36 | d__Bacteria;p__Actinobacteriota | 0.127 | opposing or balancing | -0.31 | 0.47 | ||
| normalized | phylum | rfe | d__Bacteria;p__Elusimicrobiota | higher → higher prediction | 0.71 | d__Bacteria;p__Armatimonadota | 0.029 | mutually reinforcing | 0.21 | 0.07 | ||
| normalized | phylum | rfe | d__Bacteria;__ | higher → higher prediction | 0.53 | d__Bacteria;p__Proteobacteria | 0.059 | opposing or balancing | -0.04 | 0.01 | ||
| normalized | phylum | rfe | d__Bacteria;p__Bdellovibrionota | higher → higher prediction | 0.78 | d__Bacteria;__ | 0.049 | mutually reinforcing | 0.07 | 0.27 | ||
| normalized | phylum | rfe | d__Bacteria;p__Planctomycetota | higher → higher prediction | 0.18 | d__Bacteria;p__Verrucomicrobiota | 0.120 | mutually diminishing | -0.82 | -0.12 | ||
| normalized | phylum | rfe | d__Bacteria;p__Myxococcota | higher → higher prediction | 0.74 | d__Bacteria;p__Proteobacteria | 0.081 | mutually reinforcing | 0.30 | 0.51 | ||
| normalized | phylum | rfe | d__Bacteria;p__Armatimonadota | higher → higher prediction | 0.82 | d__Bacteria;p__Elusimicrobiota | 0.029 | mutually reinforcing | 0.07 | 0.21 | ||
| normalized | phylum | rfe | d__Bacteria;p__Cyanobacteria | higher → higher prediction | 0.43 | d__Bacteria;p__Bacteroidota | 0.030 | mutually reinforcing | 0.45 | 0.01 | ||
| normalized | phylum | rfe | d__Bacteria;p__Patescibacteria | higher → lower prediction | -0.69 | d__Bacteria;p__Proteobacteria | 0.095 | opposing or balancing | 0.30 | -0.15 | ||
| normalized | phylum | rfe | Unassigned;__ | higher → lower prediction | -0.75 | d__Bacteria;p__Actinobacteriota | 0.071 | mutually reinforcing | 0.55 | 0.30 | ||
| normalized | phylum | rfe | d__Bacteria;p__Cloacimonadota | higher → higher prediction | 0.26 | d__Bacteria;p__Verrucomicrobiota | 0.019 | opposing or balancing | 0.04 | -0.70 | ||
| normalized | phylum | rfe | d__Bacteria;p__Latescibacterota | higher → lower prediction | -0.51 | d__Bacteria;__ | 0.016 | mutually reinforcing | 0.13 | 0.09 | ||
| normalized | phylum | rfe | d__Bacteria;p__Chloroflexi | higher → lower prediction | -0.78 | d__Bacteria;p__Planctomycetota | 0.025 | mutually diminishing | -0.21 | -0.53 | ||
| normalized | phylum | rfe | d__Bacteria;p__FCPU426 | higher → higher prediction | 0.35 | d__Bacteria;p__Verrucomicrobiota | 0.004 | opposing or balancing | -0.04 | 0.57 | ||
| normalized | phylum | rfe | d__Archaea;p__Crenarchaeota | higher → lower prediction | -0.05 | d__Bacteria;p__Planctomycetota | 0.026 | mutually diminishing | -0.13 | -0.49 | ||
| normalized | phylum | rfe | d__Bacteria;p__Deinococcota | higher → lower prediction | -0.27 | d__Bacteria;__ | 0.020 | opposing or balancing | 0.05 | -0.26 | ||
| normalized | phylum | rfe | d__Archaea;p__Thermoplasmatota | higher → lower prediction | -0.32 | d__Bacteria;p__Bacteroidota | 0.008 | mutually reinforcing | 0.19 | 0.05 |